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Recent Publications
- Shifman J. M., Choi M.
H., Mihalas,
S.,
Mayo S. L., and Kennedy M. B. (2006)
Ca2+/calmodulin-dependent
protein kinase II (CaMKII) is activated by calmodulin with two
bound calciums. Proc. Nat. Acad. Sci.
USA 103(38) 13968-13973.
- Yanover C., Fromer M., and
Shifman J. M. (2007)
Dead-End
Elimination for Multi-state Protein Design, J. Comp. Chem.,
28 (13)
2122-2129.
- Shifman
J.
M. (2008) Intricacies
of beta-sheet protein design, Structure
16,
1751-1752
- Yosef E., Politi R., Choi M.
H., and Shifman, J. M.
Computational design of calmodulin mutants with up to 900-fold
increase in binding specificity (2009), J. Mol.
Biol., 385,
1470-1480.
- Shifman J.
M. and M.
Fromer (2009) Search algorithms in Protein Engineering and
Design, (S. Park and J. Cochran, Eds), Taylor
& Francis.
Boca
Raton, 293-312.
- Shifman
J. M.
(2009) Computational design of protein-protein interactions in Computational Protein-Protein
interactions, ed. Gideon Schreiber and Ruth Nussinov.
Taylor
& Francis,
CRC
press, 129-144.
- Sharabi
O.,
Peleg Y., Mashiach E., Vardy E.,
Ashani Y, Silman
I., Sussman J. L., and
Shifman J. M. (2009) Design, expression, and
characterization of mutants of fasciculin optimized for
interaction with its target
acetylcholinesterase, Prot. Eng. Des. Sel.,
22,
641-648.
- Fromer M. and Shifman J. M. (2009)
Tradeoff between stability and multispecificity in design of
promiscuous proteins, PLoS Comp. Biol.,
5(12)
e1000627.
- Sharabi O., Yanover C., Dekel A.,
and Shifman J. M.
(2010) Optimizing energy functions for design of
protein-protein interfaces, J. Comp.
Chem., 32(1),
23-32.
- Filchinski D., Sharabi O.,
Rueppel A., Vetter I. R.,
Herrmann, C., and Shifman
J. M. (2010) What makes Ras an efficient molecular switch: A
biophysical and structural study of Ras-GDP interactions with
mutants of Raf, J. Mol.
Biol., 399
(3),
422-435.
- Erijman A. Aizner Y and Shifman J. M.
(2011) Multispecific recognition: mechanisms, evolution, and
design, Biochemistry, 50 (5),
602-611.
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